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international peer reviewed

Ahlering, M.A., Hailer, F., Roberts, M.T. & C. Foley (2011): A simple and accurate method to sex savannah, forest and Asian elephants using noninvasive sampling techniques. - Molecular Ecology Resources 11(5): 831–834. D
Bidon, T., Frosch, C., Eiken, H.G., Kutschera, V.E., Hagen, S.B., Aarnes, S.G., Fain, S.R., Janke, A. & F. Hailer (2013): A sensitive and specific multiplex PCR approach for sex identification of ursine and tremarctine bears suitable for non-invasive samples. - Molecular Ecology Resources 13(3): 362-368, doi: 10.1111/1755?0998.12072. D;; ;;
Domaschke, S., Fernandez Mendoza, F., Garcia, M.A., Martín, M.P. & C. Printzen (2012): Low genetic diversity in Antarctic populations of the lichen Cetraria aculeata and its photobiont. - Polar Research 31: 17353. D
Domaschke, S., Vivas, M., Sancho, L.G. & C. Printzen (2013): Ecophysiology and genetic structure of polar versus temperate populations of the lichen Cetraria aculeata. - Oecologia 173: 699-709. D
Feldmeyer B., Hoffmeier, K. & M. Pfenninger (2010): The complete mitochondrial genome of Radix balthica (Pulmonata, Basommatophora), obtained by low coverage shot gun next generation sequencing. Molecular Phylogenetics and Evolution 57: 1329-1333. D
Feldmeyer, B., Wheat, C., Krezdorn, N., Rotter, B. & M. Pfenninger (2011): Short read Illumina data for the de novo assembly of a non-model snail species transcriptome (Radix balthica, Basommatophora, Pulmonata), and a comparison of assembler performance. - BMC Genomics 12:317. D
Fennessy, J., Bock, F., Tutchings, A., Brenneman, R. & A. Janke (2013): Mitochondrial DNA analyses show that Zambia's South Luangwa Valley giraffe (Giraffa camelopardalis thornicrofti) are genetically isolated. - African Journal of Ecology 51: 635–640. D
Fernández-Mendoza, F. & C. Printzen (2013): Pleistocene expansion of the bipolar lichen Cetraria aculeata into the Southern hemisphere. - Molecular Ecology 22: 1961-1983. D
Fernandez-Mendoza, F., Domaschke, S., Garcia, M.A., Jordan, P., Martin, M.P. & C. Printzen (2011): Population structure of mycobionts and photobionts of the widespread lichen Cetraria aculeata. - Molecular Ecology 20: 1208–1232. D
González-Porter, G.P., Maldonado, J.E., Flores-Villela, O., Vogt, R.C., Janke, A., Fleischer, R.C. & F. Hailer (2013): Cryptic population structuring and the role of the Isthmus of Tehuantepec as a gene flow barrier in the critically endangered Central American River Turtle. - PLoS ONE 8(9): e71668. D;
Hailer, F., Kutschera, V.E., Hallström, B.M., Klassert, D., Fain, S.R., Leonard, J.A., Arnason, U. & A. Janke (2012): Nuclear genomic sequences reveal that polar bears are an old and distinct bear lineage. - Science. 336: 344-347. D;;
Hailer, F., Kutschera, V.E., Hallström, B.M., Fain, S.R., Leonard, J.A., Arnason, U. & A. Janke (2013): Response to Comment on ‘Nuclear Genomic Sequences Reveal that Polar Bears Are an Old and Distinct Bear Lineage’. - Science 339: 1522, doi: 10.1126/science.1228066 D;;
Hallström, B.M. & A. Janke (2010): Mammalian evolution may not be strictly bifurcating. - Molecular Biology and Evolution, 27 (12): 2804-2816. doi: 10.1093/molbev/msq166 . D
Hallström, B.M., Schneider, A., Zoller, S. & A. Janke (2011): A genomic approach to examine the complex evolution of laurasiatherian mammals. - PLoS ONE 6:e28199. D
Haun, T., Salinger, M., Pachzelt, A. & M. Pfenninger (2012): On the processes shaping small-scale population structure in Radix balthica (Linnaeus 1758). - Malacologia 55(2): 219-233. D;;
Huck, S., Büdel, B., Kadereit, J.W. & C. Printzen (2009): Range-wide phylogeography of the European temperate-montane herbaceous plant Meum athamanticum Jacq.: evidence for periglacial persistence - Journal of Biogeography 36, 1588-1599. D
Janke, A. (2010): The Rise of Amphibians: 365 Million Years of Evolution. - Systematic Biology 59(4): 488-490. D
Jansen, M., Bloch, R., Schulze, A. & M. Pfenninger (2011): Integrative inventory of Bolivia’s lowland anurans reveals hidden diversity. - Zoologica Scripta 40, 567-583. D;
Jansen, M. & G. Köhler: Reptilia, Squamata, Amphisbaenidae, Amphisbaena cegei Montero, 1997, and Reptilia, Squamata, Teidae, Tupinambis rufescens (Günther, 1871): vertical range extension. CheckList 6(4):503-504.
Kawai, K., Hailer, F., de Guia, A.P., Ichikawa, H. & T. Saitoh (2013): Refugia in glacial ages lead to the current discontinuous distribution patterns of the dark red-backed vole Myodes rex on Hokkaido, Japan. - Zoological Science, in press. D
Khan, A.A., Janke, A., Shimokawa, T. & H. Zhang (2011): Phylogenetic analysis of kindlins suggests subfunctionalization of an ancestral unduplicated kindlin into three paralogs in vertebrates. -  Evolutionary Bioinformatics online 7:7-19. [0] D
Kleven, O., Hallström, B.M., Hailer, F., Janke, A., Hagen, S.B., Kopatz, A. & G.H. Eiken (2012): Identification and evaluation of novel di- and tetranucleotide microsatellite markers from the brown bear (Ursus arctos). - Conservation Genetics Resources 4: 737-741. D;
Kuhn, T., Hailer, F., Palm, H.W. & S. Klimpel (2013): Global assessment of molecularly identified Anisakis Dujardin, 1845 (Nematoda: Anisakidae) in their teleost intermediate hosts. - Folia Parasitologica 60(2): 123-134. D;;
Kumar, V., Hallström, B.M. & A. Janke (2013): Coalescent-Based Genome Analyses Resolve the Early Branches of the Euarchontoglires. - PLoS ONE 8(4): e60019. D;
Kunihiro, S., Kowata, H., Kondou, Y., Takahashi, S., Matsui, M., Berberich, T., Youssefian, S., Hidema, J. & T. Kusano (2014): Overexpression of rice OsREX1-S, encoding a putative component of the core general transcription and DNA repair factor IIH, renders plant cells tolerant to cadmium- and UV-induced damage by enhancing DNA excision repair. - Planta, DOI: 10.1007/s00425-014-2042-1. D
Kunihiro, S., Saito, T., Matsuda, T., Inoue, M., Kuramata, M., Taguchi-Shiobara, F., Youssefian, Y., Berberich, T. & T. Kusano (2013): Rice DEP1, encoding a highly cysteine-rich G protein γ subunit, confers cadmium tolerance on yeast cells and plants. - Journal of Experimental Botany 64: 4517–4527. D
Kutschera, V.E., Lecomte, N., Janke, A., Selva, N., Sokolov, A.A., Haun, T., Steyer, K., Nowak, C. & F. Hailer (2013): A range-wide synthesis and timeline for phylogeographic events in the red fox (Vulpes vulpes). - BMC Evolutionary Biology 13(1): 114. D;;;;
Langguth, T., Honnen, A.C., Hailer, F., Mizera, M., Skoric, S., Väli, Ü. & F.E. Zachos (2013): Genetic structure and phylogeography of a European flagship species, the white-tailed sea eagle (Haliaeetus albicilla). - Journal of Avian Biology 44(3): 263-271, doi: 10.1111/j.1600-048X.2012.00075.x. D
Leavitt, S.D., Fernández-Mendoza, F., Perez-Ortega, S., Sohrabi, M., Divakar, P.K., Vondrak, J., Lumbsch, H.T. & L.L. St Clair (2013): Local representation of global diversity in a cosmopolitan lichen-forming fungal species complex (Rhizoplaca, Ascomycota). - Journal of Biogeography 40: 1792-1806. D
Lerp, H., Wronski, T., Pfenninger, M. & M. Plath (2011): A phylogeographic framework for the conservation of Saharan and Arabian dorcas gazelles (Artiodactyla: Bovidae). - Organisms, Diversity and Evolution 11, 317-329. D
Lerp, H., Wronski, T., Plath, M., Schröter, A. & M. Pfenninger (2013): Phylogenetic and population genetic analyses suggest a potential species boundary between Mountain (Gazella gazella) and Arabian Gazelles (G. arabica) in the Levant. - Mammalian Biology 78: 383-386.  D
Liu, T., Dobashi, H., Kim, D.W., Sagor, G.H.M., Niitsu, M., Berberich, T. & T. Kusano (2014): Arabidopsis mutant plants with diverse defects in polyamine metabolism show unequal sensitivity to exogenous cadaverine probably based on their spermine content. - Physiology and Molecular Biology of Plants, DOI: 10.1007/s12298-014-0227-5. D
Liu, T., Kim, D.W., Niitsu, M., Berberich, T. & T. Kusano (2014): Oryza sativa polyamine oxidase 1 back-converts tetraamines, spermine and thermospermine, to spermidine. - Plant Cell Reports 33: 143-151. D
Liu, T., Kim, D.W., Niitsu, M., Maeda, S., Watanabe, M., Kamio, Y., Berberich, T. & T. Kusano (2014): Polyamine oxidase 7 is a terminal catabolism-type enzyme in Oryza sativa and is specifically expressed in anther organ. - Plant Cell Physiology, DOI: 10.1093/pcp/pcu047. D
McCune, B. & C. Printzen (2011): Distribution and climatic niches of the Lecanora varia group in western U.S.A. - Bibliotheca Lichenologica 106, 225-234. D
Mežaka, A., Brumelis, G., Piterans, A. & C. Printzen (2012): Distribution of Lepraria in relation to tree substratum and deciduous forest type (Lepraria in deciduous forests). - Annales Botanici Fennici 49: 162-170. D
Nemec, S., Patel, S., Nowak, C. & M. Pfenninger (2013): Evolutionary determinants of population differences in population growth rate x habitat temperature interactions in Chironomus riparius. - Oecologia 172: 585-594. D;;;
Nemec, S., Heß, M., Nowak, C. & M. Pfenninger (2012): Experimental evidence for niche segregation in a species pair of non-biting midges. - Hydrobiologia 691: 203-212. D;;
Nilsson M.A., Härlid A., Kullberg M. & A. Janke (2010): The impact of fossil calibrations, codon positions and relaxed clocks on the divergence time estimates of the native Australian rodents (Conilurini). - Gene 455(1-2): 22-31. D
Nilsson, M.A., Janke, A., Murchison, E.P., Ning, Z. & B.M. Hallström (2012): Expansion of CORE-SINEs in the genome of the Tasmanian devil. - BMC Genomics. 2012 May 6; 13(1): 172. D
Nilsson, M.A., Klassert, D., Bertelsen, M.F., Hallström, B.M. & A. Janke (2012): Activity of Ancient RTE Retroposons during the Evolution of Cows, Spiral-Horned Antelopes, and Nilgais (Bovinae). - Molecular Biology and Evolution 29 (10): 2885-2888. D;
Ono, Y., Kim, D. W., Watanabe, K., Sasaki, A., Niitsu, M., Berberich, T., Kusano, T., & Y. Takahashi (2012): Constitutively and highly expressed Oryza sativa polyamine oxidases localize in peroxisomes and catalyze polyamine back conversion.  - Amino Acids 42: 867-876. DOI: 10.1007/s00726-011-1002-3 D Link to Publication
Pen, I., Uller, T., Feldmeyer, B., Harts, A., While, G. M. & E. Wapstra (2010): Climate-driven population divergence in sex-determining systems. - Nature 468: 436-438. D
Pérez-Losada, M., Bloch. R., Breinholt, J.W., Pfenninger, M. & J. Domínguez (2012): Taxonomic assessment of Lumbricidae (Oligochaeta) earthworm genera using DNA barcodes. - European Journal of Soil Biology 48: 41-47. D
Pérez-Ortega, S., Fernández Mendoza, F., Raggio, J., Vivas, M., Ascaso, C., Sancho, L.G., Printzen, C. & A. de los Ríos (2012): Extreme phenotypic variation in Cetraria aculeata (lichenized Ascomycota): Adaptation or incidental modification? - Annals of Botany 109: 1133-1148. D
Pfenninger, M., Bálint, M., & S.U. Pauls (2012): Methodological framework for projecting the potential loss of intraspecific genetic diversity due to global climate change. - BMC Evolutionary Biology 12: 224. D;;;
Pfenninger, M., Salinger, M., Haun, T. & B. Feldmeyer (2011): Factors and processes shaping the population structure and distribution of genetic variation across the species range of the freshwater snail radix balthica (Pulmonata, Basommatophora). - BMC Evolutionary Biology 11:135. D;
Pfenninger, M., Vela, E., Jesse, R., Arantzazu Elejalde, M., Liberto, F., Magnin, F. & A. Martinez-Ortia (2010): Temporal speciation pattern in the western Mediterranean genus / Tudorella/ P. Fischer, 1885 (Gastropoda, Pomatiidae) supports the Tyrrhenian vicariance hypothesis. - Molecular Phylogenetics and Evolution 54 (2010) 427–436. D
Plath, M., Pfenninger, M., Lerp, H., Riesch, R., Eschenbrenner, C., Slattery, P.A., Bierbach, D., Herrmann, N., Schulte, M., Arias-Rodriguez, L., Rimber Indy, J., Passow, C. & M. Tobler (2013): Genetic differentiation and selection against migrants in evolutionarily replicated extreme environments. - Evolution. Doi:10.1111/evo.12133. D
Printzen, C., Domaschke, S., Fernández-Mendoza, F. & S. Pérez-Ortega (2013): Biogeography and ecology of Cetraria aculeata, a widely distributed lichen with a bipolar distribution. In: Kansri Boonpragob, Peter Crittenden, H.Thorsten Lumbsch (Eds) Lichens: from genome to ecosystems in a changing world. - MycoKeys 6 (Special Issue): 33-53. D
Printzen, C., Fernández-Mendoza, F., Muggia, L., Berg, G. & M. Grube (2012): Alphaproteobacterial communities in geographically distant populations of the lichen Cetraria aculeata. - FEMS Microbiology Ecology 82: 316-325. D
Printzen, C. (2009): Uncharted terrain: The phylogeography of arctic and boreal lichens. - Plant Ecology and Diversity 1: 265-271. D
Psouni, E., Janke, A. & M. Garwicz (2012): Impact of Carnivory on Human Development and Evolution Revealed by a New Unifying Model of Weaning in Mammals. - PLoS ONE 7(4): e32452. D
Ruprecht, U., Brunauer, G. & C. Printzen (2012): Photobiont diversity and richness in lecideoid Antarctic lichens from an ecological point of view. - Lichenologist 44: 661-678. D
Sagor, G.H.M., Berberich, T., Takahashi, Y., Niitsu, M. & T. Kusano (2013): The polyamine spermine protects Arabidopsis from heat stress-induced damage by increasing expression of heat shock-related genes. - Transgenic Research 22: 595-605. D
Sagor, G.H.M., Liu, T., Takahashi, H., Niitsu, M., Berberich, T. & T. Kusano (2013): Longer uncommon polyamines have a stronger defense gene-induction activity and a higher suppressing activity of Cucumber mosaic virus multiplication compared to that of spermine in Arabidopsis thaliana. -Plant Cell Reports, doi 10.1007/s00299-013-1459-5. D
Sagor, G.H.M., Takahashi, H., Niitsu, M., Takahashi, Y., Berberich, T. & T. Kusano (2012): Exogenous thermospermine has an activity to induce a subset of the defense genes and restrict cucumber mosaic virus multiplication in Arabidopsis thaliana. - Plant Cell Reports DOI 10.1007/s00299-012-1243-y D Link to Publication
Sagor, G.H.M., Yamaguchi, K., Watanabe, K., Berberich, T., Kusano, T., Takahashi, Y. (2011):  Spatio-temporal expression analysis of Arabidopsis thaliana spermine synthase gene promoter. - Plant Biotechnology 28: 407–411. DOI: 10.5511/plantbiotechnology.11.0704a D Link to Publication
Salinger, M. & M. Pfenninger (2009): Highly polymorphic microsatellite markers for Radix balthica (Linnaeus 1758). - Molecular Ecology Ressources 9, 1152-1155. D
Scharf, K.-D., Berberich, T. , Ebersberger, I. & L. Nover (2012): The plant heat stress transcription factor (Hsf) family: structure, function and evolution.  - Biochimica et Biophysica Acta 1819: 104–119; 10.1016/j.bbagrm.2011.10.002 D Link to Publication
Schmidt, H., Greshake, B., Feldmeyer, B., Hankeln, T. & M. Pfenninger (2013): Genomic basis of ecological niche divergence among cryptic sister species of non-biting midges. - BMC Genomics 14: 384. D;
Schulze, A. & M. Jansen: A tadpole of Trachycephalus venulosus (Anura: Hylidae) as prey for a fishing spider (Araneae: Pisauridae) in the Bolivian Chiquitano Dry Forest. Herpetology Notes 3: 297-298. D
Shenton, M.R., Berberich, T., Kamo, M., Yamashita, T., Taira, H. & R. Terauchi (2012): Use of intercellular washing fluid to investigate the secreted proteome of the rice-Magnaporthe interaction. Journal of Plant Research, DOI: 10.1007/s10265-012-0473-y D
Takahashi, Y., Cong, R., Sagor, G.H., Niitsu, M., Berberich, T., Kusano, T. (2010): Characterization of five polyamine oxidase isoforms in Arabidopsis thaliana. - Plant Cell Rep 29: 955–965 D Link to Publication
Thalor, S.K., Berberich, T., Lee, S.S., Yang, S.H., Zhu, XJ.,Imai, R., Takahashi, Y. & T. Kusano (2012): Deregulation of sucrose-controlled translation of a bZIP-type transcription factor results in sucrose accumulation in leaves. - PLoS ONE 7(3): e33111. doi:10.1371/journal.pone.0033111 D Link to Publication
Tills, O., Rundle, S.D., Salinger, M., Haun, T., Pfenninger, M. & J.I. Spicer (2011): A genetic basis for intra-specific differences in developmental timing? - Evolution and Development 13(6): 542-548. D;
Yang, S.H., Kim, S.-H., Berberich, T. & T. Kusano (2012): Identification and properties of a small protein that interacts with a bZIP-type transcription factor during senescence and flower development in tobacco plants. - Plant Biotechnology 29, DOI: 10.5511/plantbiotechnology.12.0508b D
Zhu, X., Thalor, S.K., Takahashi, Y., Berberich, T. & T. Kusano (2012): An inhibitory effect of the sequence-conserved upstream open reading frame on the translation of the main open-reading frame of HsfB1 transcripts in Arabidopsis. - Plant, Cell & Environment. DOI: 10.1111/j.1365-3040.2012.02533.x. D
Zimmermann, T., Bocksberger, G., Brüggemann, W. & T. Berberich (2013): Phylogenetic relationship and molecular taxonomy of African grasses of the genus Panicum inferred from four chloroplast DNA-barcodes and nuclear gene sequences. - Journal of Plant Research 126: 363-371. D;;